Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase family protein | AMED_RS29760 | Not Available | Positive | 6472966 - 6474264 | 45008.9 |
| merr family transcriptional regulator | AMED_RS29765 | Not Available | Positive | 6474248 - 6475057 | 28865.7 |
| metalloregulator arsr/smtb family transcription factor | AMED_RS29770 | Not Available | Negative | 6475054 - 6475410 | 12832.3 |
| cation diffusion facilitator family transporter | AMED_RS29775 | Not Available | Positive | 6475466 - 6476434 | 34060.3 |
| hypothetical protein | AMED_RS29780 | Not Available | Positive | 6476475 - 6478529 | 72938.7 |
| mfs transporter | AMED_RS29785 | Not Available | Negative | 6478537 - 6479736 | 40399.1 |
| deor/glpr family dna-binding transcription regulator | AMED_RS29790 | Not Available | Negative | 6479733 - 6480509 | 26960.5 |
| tetr/acrr family transcriptional regulator | AMED_RS29795 | Not Available | Positive | 6480633 - 6481220 | 21448.7 |
| gfo/idh/moca family protein | AMED_RS29800 | Not Available | Negative | 6481217 - 6482317 | 38406.9 |
| sugar phosphate isomerase/epimerase | AMED_RS29805 | Not Available | Negative | 6482314 - 6483048 | 25319.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
