Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS29720 | Not Available | Positive | 6467518 - 6467682 | 5631.9 |
| recombinase family protein | AMED_RS29725 | Not Available | Positive | 6467672 - 6469426 | 63558.2 |
| Trna-leu | Not Available | Not Available | Positive | 6469408 - 6469491 | Not Available |
| cellulose-binding domain-containing protein | AMED_RS48995 | Not Available | Positive | 6469832 - 6470527 | 23887.8 |
| hypothetical protein | AMED_RS48090 | Not Available | Negative | 6470524 - 6470697 | 6503.31 |
| duf6480 family protein | AMED_RS29740 | Not Available | Negative | 6470727 - 6470963 | 8009.83 |
| duf3156 family protein | AMED_RS29745 | Not Available | Negative | 6471026 - 6471634 | 21189.9 |
| hsp20/alpha crystallin family protein | AMED_RS29750 | Not Available | Positive | 6471741 - 6472172 | 15930.1 |
| nitroreductase family deazaflavin-dependent oxidoreductase | AMED_RS29755 | Not Available | Negative | 6472191 - 6472637 | 15913.6 |
| hypothetical protein | AMED_RS48095 | Not Available | Negative | 6472684 - 6472839 | 5257.22 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
