Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | AMED_RS02880 | Not Available | Positive | 565463 - 566650 | 42052.1 |
| glycosyltransferase family 4 protein | AMED_RS02885 | Not Available | Positive | 566647 - 567816 | 41344.9 |
| phosphatase pap2 family protein | AMED_RS02890 | Not Available | Positive | 567813 - 568460 | 22001.4 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS02895 | Not Available | Positive | 568776 - 569390 | 22312.9 |
| right-handed parallel beta-helix repeat-containing protein | AMED_RS02900 | Not Available | Negative | 569602 - 571083 | 51882.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | AMED_RS02905 | Not Available | Negative | 571177 - 572493 | 47030.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | AMED_RS02910 | Not Available | Negative | 572502 - 573050 | 20119.6 |
| polysaccharide pyruvyl transferase family protein | AMED_RS02915 | Not Available | Negative | 573047 - 574231 | 43084.8 |
| glycosyltransferase family 2 protein | AMED_RS02920 | Not Available | Negative | 574228 - 575172 | 35679.0 |
| membrane protein | AMED_RS02925 | Not Available | Negative | 575180 - 576505 | 45725.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
