Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class e sortase | AMED_RS00205 | Not Available | Positive | 41881 - 42939 | 37705.6 |
| hypothetical protein | AMED_RS47885 | Not Available | Positive | 42939 - 43094 | 5927.62 |
| sco5389 family protein | AMED_RS00210 | Not Available | Negative | 43199 - 43591 | 14075.5 |
| abc transporter permease | AMED_RS00215 | Not Available | Negative | 43692 - 44426 | 25467.0 |
| abc transporter atp-binding protein | AMED_RS00220 | Not Available | Negative | 44423 - 45136 | 25643.7 |
| histidine kinase | AMED_RS00225 | Not Available | Positive | 45307 - 47130 | 66745.2 |
| response regulator transcription factor | AMED_RS00230 | Not Available | Positive | 47070 - 47729 | 23205.9 |
| fad-dependent oxidoreductase | AMED_RS00235 | Not Available | Negative | 47726 - 49045 | 47653.4 |
| aminodeoxychorismate/anthranilate synthase component ii | AMED_RS00240 | Not Available | Positive | 49158 - 49802 | 23348.0 |
| abc transporter atp-binding protein | AMED_RS00245 | Not Available | Positive | 49799 - 50590 | 27971.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
