Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| effector-associated domain 2-containing protein | AMED_RS29670 | Not Available | Positive | 6459113 - 6460153 | 37662.0 |
| integrase core domain-containing protein | AMED_RS29675 | Not Available | Negative | 6460277 - 6460825 | 21103.6 |
| hypothetical protein | AMED_RS29680 | Not Available | Negative | 6460906 - 6461343 | 16606.8 |
| hypothetical protein | AMED_RS29685 | Not Available | Negative | 6461387 - 6461710 | 11885.3 |
| metal-dependent hydrolase | AMED_RS29690 | Not Available | Positive | 6461844 - 6462623 | 27813.4 |
| hypothetical protein | AMED_RS29695 | Not Available | Negative | 6462671 - 6463357 | 25348.8 |
| aldehyde dehydrogenase family protein | AMED_RS49555 | Not Available | Positive | 6463720 - 6464301 | 21398.9 |
| hypothetical protein | AMED_RS29705 | Not Available | Negative | 6464518 - 6464892 | 13194.3 |
| wd40 repeat domain-containing protein | AMED_RS29710 | Not Available | Negative | 6465092 - 6466732 | 58242.1 |
| metal-dependent hydrolase | AMED_RS29715 | Not Available | Positive | 6466859 - 6467521 | 23726.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
