Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6998 domain-containing protein | AMED_RS29525 | Not Available | Positive | 6421732 - 6422229 | 18077.4 |
| hypothetical protein | AMED_RS29535 | Not Available | Positive | 6423266 - 6423826 | 21097.5 |
| hypothetical protein | AMED_RS29540 | Not Available | Positive | 6423823 - 6424473 | 24369.1 |
| hypothetical protein | AMED_RS29545 | Not Available | Positive | 6424470 - 6425603 | 40641.8 |
| hypothetical protein | AMED_RS29550 | Not Available | Negative | 6425558 - 6425983 | 15923.7 |
| hypothetical protein | AMED_RS29555 | Not Available | Negative | 6426307 - 6426861 | 20034.8 |
| is5 family transposase | AMED_RS29560 | Not Available | Positive | 6426917 - 6427749 | 31053.7 |
| hypothetical protein | AMED_RS29565 | Not Available | Negative | 6427848 - 6428453 | 21909.8 |
| pentapeptide repeat-containing protein | AMED_RS48980 | Not Available | Positive | 6429675 - 6430139 | 16857.4 |
| metal-dependent hydrolase | AMED_RS48985 | Not Available | Negative | 6430118 - 6430232 | 4307.28 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
