Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | AMED_RS29475 | Not Available | Negative | 6409745 - 6410977 | 43192.3 |
| tetratricopeptide repeat protein | AMED_RS29480 | Not Available | Positive | 6411120 - 6413210 | 76305.9 |
| hypothetical protein | AMED_RS29485 | Not Available | Negative | 6413224 - 6414240 | 36484.2 |
| taud/tfda family dioxygenase | AMED_RS29490 | Not Available | Negative | 6414237 - 6414947 | 26090.0 |
| chat domain-containing protein | AMED_RS29495 | Not Available | Positive | 6415111 - 6417075 | 68912.5 |
| chat domain-containing protein | AMED_RS29500 | Not Available | Positive | 6417072 - 6419045 | 69725.9 |
| hypothetical protein | AMED_RS29505 | Not Available | Negative | 6419062 - 6419838 | 28507.5 |
| hypothetical protein | AMED_RS29510 | Not Available | Negative | 6419855 - 6420580 | 26620.1 |
| hypothetical protein | AMED_RS29515 | Not Available | Positive | 6420760 - 6421017 | 9182.97 |
| hypothetical protein | AMED_RS29520 | Not Available | Negative | 6421202 - 6421585 | 13906.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
