Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | AMED_RS29440 | Not Available | Negative | 6399946 - 6402639 | 98446.1 |
| hypothetical protein | AMED_RS49550 | Not Available | Negative | 6402903 - 6403031 | 4598.52 |
| metal-dependent hydrolase | AMED_RS48965 | Not Available | Positive | 6403242 - 6403507 | 9499.62 |
| recombinase family protein | AMED_RS29445 | Not Available | Positive | 6403675 - 6405090 | 52915.1 |
| site-specific integrase | AMED_RS29450 | Not Available | Negative | 6405315 - 6406382 | 39079.1 |
| hypothetical protein | AMED_RS48970 | Not Available | Negative | 6406385 - 6406756 | 13259.0 |
| duf2637 domain-containing protein | AMED_RS49720 | Not Available | Positive | 6407383 - 6407610 | 8299.06 |
| hypothetical protein | AMED_RS49725 | Not Available | Positive | 6407863 - 6408009 | 5684.66 |
| hypothetical protein | AMED_RS29465 | Not Available | Negative | 6408156 - 6409118 | 34574.9 |
| hypothetical protein | AMED_RS29470 | Not Available | Negative | 6409130 - 6409741 | 22954.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
