Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr c-terminal-related transcriptional regulator | AMED_RS29390 | Not Available | Negative | 6390320 - 6390517 | 7348.05 |
| laci family dna-binding transcriptional regulator | AMED_RS29395 | Not Available | Positive | 6390783 - 6391781 | 35387.2 |
| nuclear transport factor 2 family protein | AMED_RS29400 | Not Available | Negative | 6391948 - 6392355 | 14706.2 |
| mbl fold metallo-hydrolase | AMED_RS29405 | Not Available | Negative | 6392346 - 6393152 | 28475.6 |
| dsba family protein | AMED_RS29410 | Not Available | Negative | 6393172 - 6393801 | 21526.5 |
| arac family transcriptional regulator | AMED_RS29415 | Not Available | Positive | 6393865 - 6394734 | 31508.5 |
| hypothetical protein | AMED_RS29420 | Not Available | Negative | 6394837 - 6395037 | 7113.38 |
| alpha-l-rhamnosidase | AMED_RS29425 | Not Available | Negative | 6395392 - 6398583 | 113828.0 |
| hypothetical protein | AMED_RS29430 | Not Available | Negative | 6398724 - 6399113 | 13587.4 |
| transposase | AMED_RS29435 | Not Available | Negative | 6399175 - 6399606 | 16056.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
