Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase family protein subunit m | AMED_RS29290 | Not Available | Negative | 6368244 - 6369215 | 34155.1 |
| metal-dependent hydrolase | AMED_RS29295 | Not Available | Negative | 6369222 - 6369566 | 12022.5 |
| duf2255 family protein | AMED_RS29300 | Not Available | Negative | 6369771 - 6370160 | 14707.1 |
| aldo/keto reductase | AMED_RS29305 | Not Available | Negative | 6370157 - 6371134 | 35229.6 |
| zinc-binding dehydrogenase | AMED_RS29310 | Not Available | Negative | 6371149 - 6372183 | 36341.4 |
| oxidoreductase | AMED_RS29315 | Not Available | Positive | 6372314 - 6373162 | 29542.9 |
| helix-turn-helix transcriptional regulator | AMED_RS29320 | Not Available | Negative | 6373134 - 6373580 | 16186.2 |
| aldo/keto reductase | AMED_RS29325 | Not Available | Negative | 6373637 - 6374518 | 32080.9 |
| helix-turn-helix transcriptional regulator | AMED_RS29330 | Not Available | Negative | 6374579 - 6375460 | 32478.4 |
| cupin domain-containing protein | AMED_RS29335 | Not Available | Positive | 6375585 - 6375989 | 14659.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
