Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate/nitrite transporter family protein | AMED_RS29245 | Not Available | Negative | 6356346 - 6357197 | 28546.3 |
| slc13 family permease | AMED_RS29250 | Not Available | Negative | 6358059 - 6359351 | 45114.5 |
| cbs domain-containing protein | AMED_RS29255 | Not Available | Negative | 6359371 - 6359817 | 15859.4 |
| sodium:proton antiporter | AMED_RS29260 | Not Available | Negative | 6359857 - 6361083 | 42726.0 |
| hypothetical protein | AMED_RS29265 | Not Available | Negative | 6361257 - 6361448 | 7027.71 |
| amino acid permease | AMED_RS29270 | Not Available | Positive | 6361737 - 6363128 | 47801.9 |
| sam-dependent methyltransferase | AMED_RS29275 | Not Available | Positive | 6363218 - 6364075 | 31809.2 |
| duf1003 domain-containing protein | AMED_RS29280 | Not Available | Positive | 6366832 - 6367236 | 15319.4 |
| hypothetical protein | AMED_RS48470 | Not Available | Negative | 6367238 - 6367342 | 3721.61 |
| hypothetical protein | AMED_RS48475 | Not Available | Negative | 6367759 - 6368247 | 17435.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
