Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4383 domain-containing protein | AMED_RS29195 | Not Available | Positive | 6346834 - 6347313 | 17008.0 |
| hypothetical protein | AMED_RS29200 | Not Available | Positive | 6347318 - 6347614 | 10515.5 |
| formate dehydrogenase | AMED_RS29210 | Not Available | Positive | 6347662 - 6350943 | 121257.0 |
| 4fe-4s dicluster domain-containing protein | AMED_RS29215 | Not Available | Positive | 6350999 - 6351829 | 29626.8 |
| nrfd/psrc family molybdoenzyme membrane anchor subunit | AMED_RS29220 | Not Available | Positive | 6351826 - 6352821 | 33879.8 |
| metal-dependent hydrolase | AMED_RS29225 | Not Available | Positive | 6352851 - 6353093 | 8149.68 |
| acyl-coa dehydrogenase family protein | AMED_RS29230 | Not Available | Positive | 6353187 - 6354302 | 38421.7 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | AMED_RS29235 | Not Available | Positive | 6354302 - 6354973 | 23614.1 |
| hypothetical protein | AMED_RS48465 | Not Available | Positive | 6354979 - 6355143 | 6006.98 |
| hypothetical protein | AMED_RS29240 | Not Available | Positive | 6355140 - 6356324 | 43153.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
