Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell wall metabolism sensor histidine kinase walk | AMED_RS29145 | Not Available | Positive | 6337571 - 6338935 | 49234.9 |
| hypothetical protein | AMED_RS29150 | Not Available | Positive | 6338932 - 6339132 | 6728.03 |
| hypothetical protein | AMED_RS29155 | Not Available | Positive | 6339137 - 6339352 | 7926.44 |
| helix-turn-helix domain-containing protein | AMED_RS29160 | Not Available | Positive | 6339349 - 6340050 | 25949.2 |
| duf4142 domain-containing protein | AMED_RS29165 | Not Available | Positive | 6340117 - 6340758 | 23200.7 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS29170 | Not Available | Positive | 6340911 - 6341405 | 17436.2 |
| chloride channel protein | AMED_RS29175 | Not Available | Negative | 6341507 - 6343264 | 60791.5 |
| glycoside hydrolase family 15 protein | AMED_RS29180 | Not Available | Positive | 6343600 - 6345375 | 64934.5 |
| spw repeat protein | AMED_RS29185 | Not Available | Negative | 6345529 - 6345969 | 15110.7 |
| phage holin family protein | AMED_RS29190 | Not Available | Positive | 6346359 - 6346742 | 12706.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
