Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | AMED_RS29090 | Not Available | Positive | 6328576 - 6330282 | 63584.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | AMED_RS29095 | Not Available | Positive | 6330279 - 6331370 | 39924.2 |
| metal-dependent hydrolase | AMED_RS29100 | Not Available | Positive | 6331370 - 6332955 | 56078.2 |
| hypothetical protein | AMED_RS29110 | Not Available | Positive | 6332966 - 6333199 | 8286.31 |
| duf4396 domain-containing protein | AMED_RS29115 | Not Available | Negative | 6333208 - 6333897 | 25570.8 |
| hypothetical protein | AMED_RS29120 | Not Available | Negative | 6334030 - 6334488 | 16818.7 |
| nitroreductase family deazaflavin-dependent oxidoreductase | AMED_RS29125 | Not Available | Negative | 6334565 - 6335023 | 17178.1 |
| fad-dependent monooxygenase | AMED_RS29130 | Not Available | Negative | 6335020 - 6336213 | 43430.4 |
| tetr/acrr family transcriptional regulator | AMED_RS29135 | Not Available | Negative | 6336233 - 6336787 | 19065.2 |
| response regulator transcription factor | AMED_RS29140 | Not Available | Positive | 6336888 - 6337574 | 25106.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
