Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS48950 | Not Available | Positive | 6316975 - 6317343 | 13484.0 |
| tetr/acrr family transcriptional regulator | AMED_RS29040 | Not Available | Negative | 6317404 - 6317994 | 21557.8 |
| srpbcc domain-containing protein | AMED_RS29045 | Not Available | Positive | 6318084 - 6318602 | 18643.8 |
| sdr family oxidoreductase | AMED_RS29050 | Not Available | Positive | 6318608 - 6319435 | 29302.5 |
| duf6292 family protein | AMED_RS29055 | Not Available | Negative | 6319499 - 6319903 | 14492.2 |
| ycii family protein | AMED_RS29060 | Not Available | Negative | 6320265 - 6320624 | 12782.1 |
| tfox/sxy family protein | AMED_RS29065 | Not Available | Negative | 6320770 - 6321123 | 12782.5 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | AMED_RS29070 | Not Available | Positive | 6321254 - 6325165 | 144041.0 |
| cation:proton antiporter | AMED_RS29075 | Not Available | Negative | 6325662 - 6327131 | 51185.5 |
| spw repeat protein | AMED_RS29085 | Not Available | Negative | 6327683 - 6328342 | 22740.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
