Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nmra family nad(p)-binding protein | AMED_RS48460 | Not Available | Positive | 6301825 - 6302154 | 10863.8 |
| metal-dependent hydrolase | AMED_RS49710 | Not Available | Positive | 6302117 - 6302269 | 5472.72 |
| alpha/beta hydrolase | AMED_RS28950 | Not Available | Negative | 6302496 - 6304031 | 53656.5 |
| hypothetical protein | AMED_RS28955 | Not Available | Negative | 6304911 - 6305207 | 9714.41 |
| hypothetical protein | AMED_RS28960 | Not Available | Negative | 6305592 - 6305987 | 13716.7 |
| putative quinol monooxygenase | AMED_RS28965 | Not Available | Negative | 6306292 - 6306618 | 12802.4 |
| fad-dependent monooxygenase | AMED_RS28970 | Not Available | Negative | 6306618 - 6308033 | 50918.1 |
| tetr/acrr family transcriptional regulator | AMED_RS28975 | Not Available | Positive | 6308121 - 6308684 | 19923.1 |
| sgcj/ecac family oxidoreductase | AMED_RS28980 | Not Available | Negative | 6308647 - 6309027 | 13517.0 |
| cupin domain-containing protein | AMED_RS28985 | Not Available | Negative | 6309024 - 6309467 | 15789.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
