Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | AMED_RS28890 | Not Available | Negative | 6294952 - 6295188 | 8695.36 |
| metal-dependent hydrolase | AMED_RS28895 | Not Available | Positive | 6295203 - 6295699 | 16081.4 |
| hypothetical protein | AMED_RS28900 | Not Available | Negative | 6295848 - 6297095 | 47302.4 |
| metal-dependent hydrolase | AMED_RS48920 | Not Available | Positive | 6297411 - 6297811 | 15039.9 |
| ycii family protein | AMED_RS28910 | Not Available | Positive | 6297985 - 6298359 | 13432.9 |
| rna polymerase sigma factor | AMED_RS28915 | Not Available | Positive | 6298356 - 6299588 | 44790.0 |
| hypothetical protein | AMED_RS28920 | Not Available | Positive | 6299670 - 6299975 | 11489.4 |
| hypothetical protein | AMED_RS28925 | Not Available | Positive | 6300027 - 6300365 | 11392.2 |
| carboxymuconolactone decarboxylase family protein | AMED_RS28930 | Not Available | Positive | 6300352 - 6300933 | 20702.2 |
| isochorismatase family protein | AMED_RS28935 | Not Available | Positive | 6301180 - 6301764 | 20858.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
