Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS28795 | Not Available | Negative | 6276001 - 6276384 | 13849.5 |
| laci family dna-binding transcriptional regulator | AMED_RS28800 | Not Available | Positive | 6276494 - 6277114 | 22169.2 |
| hamp domain-containing sensor histidine kinase | AMED_RS28805 | Not Available | Negative | 6277140 - 6278504 | 48576.2 |
| response regulator transcription factor | AMED_RS28810 | Not Available | Negative | 6278501 - 6279196 | 25558.8 |
| glycosyltransferase | AMED_RS28815 | Not Available | Positive | 6279396 - 6280649 | 45577.8 |
| glycosyltransferase family 39 protein | AMED_RS28820 | Not Available | Positive | 6280646 - 6282787 | 73761.9 |
| tetr/acrr family transcriptional regulator | AMED_RS28825 | Not Available | Positive | 6282882 - 6283496 | 22476.8 |
| mdr family mfs transporter | AMED_RS28830 | Not Available | Positive | 6283513 - 6285066 | 54415.8 |
| fad-dependent monooxygenase | AMED_RS28835 | Not Available | Positive | 6285106 - 6286326 | 44676.4 |
| tetr family transcriptional regulator | AMED_RS28840 | Not Available | Positive | 6286425 - 6286856 | 15420.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
