Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sortase | AMED_RS28745 | Not Available | Negative | 6263593 - 6264483 | 30231.7 |
| hypothetical protein | AMED_RS28750 | Not Available | Negative | 6264468 - 6265325 | 28484.1 |
| hypothetical protein | AMED_RS28755 | Not Available | Negative | 6265343 - 6266050 | 23592.1 |
| hypothetical protein | AMED_RS28760 | Not Available | Negative | 6266034 - 6267044 | 34382.1 |
| ig-like domain-containing protein | AMED_RS28765 | Not Available | Negative | 6267112 - 6268695 | 51076.6 |
| hypothetical protein | AMED_RS28770 | Not Available | Negative | 6268719 - 6269705 | 33367.4 |
| hypothetical protein | AMED_RS28775 | Not Available | Negative | 6269856 - 6272222 | 80932.0 |
| phosphate abc transporter substrate-binding protein psts | AMED_RS28780 | Not Available | Negative | 6272219 - 6273796 | 54196.1 |
| phosphate abc transporter permease psta | AMED_RS28785 | Not Available | Negative | 6273793 - 6274929 | 39374.1 |
| phosphate abc transporter permease subunit pstc | AMED_RS28790 | Not Available | Negative | 6274926 - 6275930 | 34765.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
