Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS02780 | Not Available | Negative | 539728 - 540000 | 9898.4 |
| hypothetical protein | AMED_RS02785 | Not Available | Positive | 540386 - 541105 | 24801.3 |
| polyprenyl synthetase family protein | AMED_RS02790 | Not Available | Positive | 541163 - 542215 | 36997.0 |
| hypothetical protein | AMED_RS02795 | Not Available | Positive | 542239 - 543504 | 45754.5 |
| voc family protein | AMED_RS02800 | Not Available | Negative | 543497 - 543838 | 12015.2 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | AMED_RS02805 | Not Available | Negative | 543935 - 544999 | 38207.3 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | AMED_RS02810 | Not Available | Negative | 544996 - 546921 | 68225.5 |
| enoyl-coa hydratase | AMED_RS02815 | Not Available | Negative | 547181 - 547945 | 26078.4 |
| lrp/asnc family transcriptional regulator | AMED_RS02820 | Not Available | Negative | 548233 - 548679 | 16045.5 |
| dimethylargininase | AMED_RS02825 | Not Available | Positive | 548753 - 549598 | 31090.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
