Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS28695 | Not Available | Positive | 6253145 - 6253771 | 22910.2 |
| peroxidase | AMED_RS28700 | Not Available | Positive | 6253780 - 6255135 | 50124.1 |
| catalase family protein | AMED_RS28705 | Not Available | Positive | 6255135 - 6256265 | 41511.9 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS28710 | Not Available | Negative | 6256314 - 6257036 | 24362.4 |
| mfs transporter | AMED_RS28715 | Not Available | Negative | 6257432 - 6258865 | 49769.1 |
| tetr/acrr family transcriptional regulator | AMED_RS28720 | Not Available | Positive | 6258945 - 6259532 | 20880.8 |
| helix-turn-helix transcriptional regulator | AMED_RS28725 | Not Available | Negative | 6259817 - 6260119 | 10980.1 |
| tigr04141 family sporadically distributed protein | AMED_RS28730 | Not Available | Negative | 6260119 - 6261780 | 60160.0 |
| uma2 family endonuclease | AMED_RS28735 | Not Available | Positive | 6262222 - 6262761 | 19826.0 |
| phosphate abc transporter atp-binding protein | AMED_RS28740 | Not Available | Negative | 6262779 - 6263576 | 28722.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
