Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | AMED_RS28600 | Not Available | Negative | 6230592 - 6231461 | 31880.6 |
| methyltransferase | AMED_RS48900 | Not Available | Negative | 6231920 - 6232240 | 11319.6 |
| metal-dependent hydrolase | AMED_RS48905 | Not Available | Negative | 6232329 - 6232514 | 6742.14 |
| hypothetical protein | AMED_RS48445 | Not Available | Negative | 6232502 - 6232699 | 6912.28 |
| cytochrome p450 | AMED_RS28615 | Not Available | Negative | 6232709 - 6233896 | 42366.2 |
| heparin lyase i family protein | AMED_RS28620 | Not Available | Negative | 6234024 - 6234737 | 25715.2 |
| cytochrome p450 | AMED_RS28625 | Not Available | Negative | 6234851 - 6236035 | 43728.3 |
| fad-dependent monooxygenase | AMED_RS28630 | Not Available | Negative | 6236339 - 6237883 | 54685.4 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS28635 | Not Available | Positive | 6237928 - 6238404 | 16769.2 |
| duf5662 family protein | AMED_RS28640 | Not Available | Negative | 6238854 - 6239348 | 18574.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
