Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ricin domain-containing protein | AMED_RS48890 | Not Available | Negative | 6211397 - 6211519 | 4208.95 |
| hypothetical protein | AMED_RS28510 | Not Available | Positive | 6211525 - 6211797 | 9199.73 |
| tetratricopeptide repeat protein | AMED_RS28515 | Not Available | Positive | 6212223 - 6214715 | 91387.3 |
| oxidoreductase | AMED_RS28520 | Not Available | Negative | 6214866 - 6215654 | 27054.2 |
| tetr/acrr family transcriptional regulator | AMED_RS28525 | Not Available | Positive | 6215713 - 6216276 | 20533.5 |
| metal-dependent hydrolase | AMED_RS28530 | Not Available | Negative | 6216332 - 6217466 | 41493.8 |
| ycii family protein | AMED_RS28535 | Not Available | Negative | 6217384 - 6217797 | 15155.1 |
| helix-turn-helix transcriptional regulator | AMED_RS28540 | Not Available | Negative | 6217993 - 6218301 | 11172.5 |
| haloacid dehalogenase type ii | AMED_RS28545 | Not Available | Positive | 6218380 - 6219051 | 23686.2 |
| hypothetical protein | AMED_RS28550 | Not Available | Positive | 6219463 - 6219645 | 6671.85 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
