Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpf/raia family ribosome-associated protein | AMED_RS28405 | Not Available | Negative | 6192991 - 6193347 | 12795.9 |
| hypothetical protein | AMED_RS48880 | Not Available | Negative | 6193561 - 6193974 | 14562.4 |
| ybdk family carboxylate-amine ligase | AMED_RS28415 | Not Available | Positive | 6194458 - 6195633 | 40456.5 |
| hypothetical protein | AMED_RS28420 | Not Available | Positive | 6195855 - 6196163 | 10784.8 |
| hypothetical protein | AMED_RS28425 | Not Available | Positive | 6196483 - 6196653 | 5882.03 |
| hypothetical protein | AMED_RS49525 | Not Available | Negative | 6196740 - 6196910 | 6379.48 |
| duf5994 family protein | AMED_RS48885 | Not Available | Negative | 6196907 - 6197410 | 18275.9 |
| patatin-like phospholipase family protein | AMED_RS28440 | Not Available | Negative | 6197403 - 6198290 | 30058.7 |
| amidohydrolase family protein | AMED_RS28445 | Not Available | Negative | 6198287 - 6199042 | 27582.6 |
| tetr/acrr family transcriptional regulator | AMED_RS28450 | Not Available | Positive | 6199208 - 6199747 | 19480.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
