Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | AMED_RS28315 | Not Available | Positive | 6177218 - 6178207 | 36079.1 |
| hypothetical protein | AMED_RS28320 | Not Available | Negative | 6178369 - 6178539 | 6208.84 |
| gaf domain-containing sensor histidine kinase | AMED_RS28325 | Not Available | Negative | 6178882 - 6180474 | 55518.2 |
| hypothetical protein | AMED_RS28330 | Not Available | Positive | 6180622 - 6181524 | 31892.6 |
| response regulator transcription factor | AMED_RS28335 | Not Available | Negative | 6181484 - 6182152 | 23829.9 |
| bon domain-containing protein | AMED_RS28340 | Not Available | Positive | 6182245 - 6182919 | 24070.5 |
| slipin family protein | AMED_RS28345 | Not Available | Positive | 6182958 - 6183806 | 30545.5 |
| hypothetical protein | AMED_RS28350 | Not Available | Positive | 6183894 - 6184391 | 17216.8 |
| hypothetical protein | AMED_RS48050 | Not Available | Negative | 6184399 - 6184557 | 5498.51 |
| phosphoribosyltransferase | AMED_RS28355 | Not Available | Negative | 6184777 - 6185433 | 23546.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
