Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS28265 | Not Available | Negative | 6168275 - 6168637 | 12485.9 |
| hypothetical protein | AMED_RS28270 | Not Available | Negative | 6168726 - 6169028 | 10367.2 |
| tetratricopeptide repeat protein | AMED_RS28275 | Not Available | Positive | 6169217 - 6171580 | 85416.9 |
| padr family transcriptional regulator | AMED_RS28280 | Not Available | Negative | 6171891 - 6172202 | 10851.2 |
| alpha/beta hydrolase | AMED_RS28285 | Not Available | Positive | 6172282 - 6173475 | 40853.0 |
| antar domain-containing protein | AMED_RS28290 | Not Available | Negative | 6173525 - 6173689 | 5902.11 |
| hypothetical protein | AMED_RS28295 | Not Available | Negative | 6173975 - 6174313 | 12065.3 |
| endo-beta-n-acetylglucosaminidase h | AMED_RS28300 | Not Available | Positive | 6174621 - 6175523 | 31562.2 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS28305 | Not Available | Negative | 6176008 - 6176538 | 19575.4 |
| nadph-dependent fmn reductase | AMED_RS28310 | Not Available | Positive | 6176648 - 6177211 | 20549.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
