Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuoh | AMED_RS02730 | Not Available | Positive | 529010 - 530359 | 48711.6 |
| nadh-quinone oxidoreductase subunit nuoi | AMED_RS02735 | Not Available | Positive | 530346 - 530870 | 19398.1 |
| nadh-quinone oxidoreductase subunit j | AMED_RS02740 | Not Available | Positive | 530867 - 531742 | 30121.0 |
| nadh-quinone oxidoreductase subunit nuok | AMED_RS02745 | Not Available | Positive | 531739 - 532038 | 10743.7 |
| nadh-quinone oxidoreductase subunit l | AMED_RS02750 | Not Available | Positive | 532050 - 533951 | 67824.9 |
| nadh-quinone oxidoreductase subunit m | AMED_RS02755 | Not Available | Positive | 533951 - 535501 | 54587.5 |
| nadh-quinone oxidoreductase subunit nuon | AMED_RS02760 | Not Available | Positive | 535504 - 537072 | 54091.0 |
| esx secretion-associated protein espg | AMED_RS02765 | Not Available | Negative | 537118 - 537786 | 24226.7 |
| ppe domain-containing protein | AMED_RS02770 | Not Available | Negative | 537783 - 539120 | 46464.2 |
| duf3558 domain-containing protein | AMED_RS02775 | Not Available | Negative | 539120 - 539728 | 20873.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
