Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS28215 | Not Available | Negative | 6158687 - 6159031 | 13267.4 |
| hypothetical protein | AMED_RS28220 | Not Available | Negative | 6159031 - 6160374 | 47170.4 |
| type vii secretion target | AMED_RS28225 | Not Available | Negative | 6160371 - 6160703 | 11016.2 |
| ybab/ebfc family nucleoid-associated protein | AMED_RS28230 | Not Available | Negative | 6160720 - 6161199 | 16701.6 |
| cytochrome p450 | AMED_RS28235 | Not Available | Negative | 6161587 - 6162819 | 45084.4 |
| cytochrome p450 | AMED_RS28240 | Not Available | Negative | 6162977 - 6163870 | 32399.8 |
| ketopantoate reductase c-terminal domain-containing protein | AMED_RS48870 | Not Available | Positive | 6164582 - 6164785 | 7259.8 |
| hypothetical protein | AMED_RS28250 | Not Available | Positive | 6164804 - 6165238 | 16001.8 |
| iclr family transcriptional regulator | AMED_RS28255 | Not Available | Positive | 6165400 - 6166194 | 28679.7 |
| mfs transporter | AMED_RS28260 | Not Available | Positive | 6166296 - 6167690 | 49835.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
