Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | AMED_RS28165 | Not Available | Positive | 6147453 - 6148367 | 34508.5 |
| glycosyltransferase | AMED_RS28170 | Not Available | Positive | 6148364 - 6149623 | 46717.1 |
| abc transporter atp-binding protein | AMED_RS28175 | Not Available | Positive | 6149643 - 6151544 | 68526.1 |
| abc transporter atp-binding protein | AMED_RS28180 | Not Available | Positive | 6151541 - 6153331 | 63684.8 |
| metal-dependent hydrolase | AMED_RS28185 | Not Available | Negative | 6153536 - 6153796 | 9942.01 |
| duf2306 domain-containing protein | AMED_RS28190 | Not Available | Positive | 6153950 - 6154711 | 28393.2 |
| sam-dependent methyltransferase | AMED_RS28195 | Not Available | Positive | 6154913 - 6155704 | 29116.3 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS28200 | Not Available | Positive | 6155749 - 6157140 | 49663.2 |
| epoxide hydrolase family protein | AMED_RS28205 | Not Available | Positive | 6157145 - 6158266 | 41945.3 |
| alpha/beta hydrolase fold domain-containing protein | AMED_RS28210 | Not Available | Negative | 6158346 - 6158654 | 10863.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
