Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | AMED_RS49700 | Not Available | Positive | 6135020 - 6136081 | 37670.3 |
| diguanylate cyclase | AMED_RS28110 | Not Available | Positive | 6136602 - 6137840 | 44117.1 |
| hypothetical protein | AMED_RS48865 | Not Available | Negative | 6138170 - 6138835 | 24092.5 |
| ricin domain-containing protein | AMED_RS28120 | Not Available | Negative | 6139329 - 6139835 | 17317.8 |
| hypothetical protein | AMED_RS28130 | Not Available | Positive | 6140489 - 6140818 | 11843.0 |
| mfs transporter | AMED_RS28135 | Not Available | Negative | 6140834 - 6142273 | 48749.3 |
| duf6271 family protein | AMED_RS28145 | Not Available | Positive | 6143079 - 6144299 | 45570.9 |
| gnat family n-acetyltransferase | AMED_RS28150 | Not Available | Positive | 6144292 - 6145920 | 57504.5 |
| sgcj/ecac family oxidoreductase | AMED_RS28155 | Not Available | Negative | 6146127 - 6146609 | 17605.8 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS28160 | Not Available | Negative | 6146704 - 6147207 | 17868.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
