Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | AMED_RS28060 | Not Available | Negative | 6117880 - 6124806 | 245492.0 |
| lamg domain-containing protein | AMED_RS28065 | Not Available | Negative | 6124875 - 6129089 | 146415.0 |
| metal-dependent hydrolase | AMED_RS48270 | Not Available | Negative | 6129715 - 6129849 | 4606.44 |
| cytochrome p450 | AMED_RS48275 | Not Available | Positive | 6130366 - 6131133 | 27361.6 |
| metal-dependent hydrolase | AMED_RS49515 | Not Available | Positive | 6131114 - 6131524 | 15074.7 |
| phosphotransferase | AMED_RS49520 | Not Available | Positive | 6131596 - 6132102 | 19162.4 |
| voc family protein | AMED_RS28085 | Not Available | Positive | 6132190 - 6132753 | 20668.2 |
| hypothetical protein | AMED_RS28090 | Not Available | Positive | 6132815 - 6133711 | 32006.3 |
| llm class flavin-dependent oxidoreductase | AMED_RS28095 | Not Available | Positive | 6133708 - 6134580 | 31075.9 |
| gamma-glutamyltransferase | AMED_RS49695 | Not Available | Positive | 6134580 - 6135023 | 15179.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
