Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS28010 | Not Available | Positive | 6111324 - 6111827 | 17594.4 |
| aaa family atpase | AMED_RS28015 | Not Available | Positive | 6112095 - 6112604 | 18263.1 |
| alpha/beta hydrolase | AMED_RS28020 | Not Available | Negative | 6112726 - 6113052 | 10853.7 |
| signal peptidase i | AMED_RS28025 | Not Available | Positive | 6113491 - 6114426 | 33534.9 |
| sdr family oxidoreductase | AMED_RS28030 | Not Available | Negative | 6114578 - 6114823 | 8529.25 |
| metal-dependent hydrolase | AMED_RS28035 | Not Available | Positive | 6114824 - 6115021 | 6851.39 |
| histidine phosphatase family protein | AMED_RS28040 | Not Available | Positive | 6115073 - 6115702 | 23509.8 |
| rhs repeat-associated core domain-containing protein | AMED_RS28045 | Not Available | Negative | 6115660 - 6116187 | 19103.1 |
| is3 family transposase | AMED_RS48265 | Not Available | Positive | 6116315 - 6116638 | 11988.4 |
| is3 family transposase | AMED_RS28055 | Not Available | Positive | 6116638 - 6117555 | 33551.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
