Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS27960 | Not Available | Negative | 6102449 - 6102934 | 17801.5 |
| mbl fold metallo-hydrolase | AMED_RS27965 | Not Available | Positive | 6103055 - 6103861 | 28561.8 |
| nuclear transport factor 2 family protein | AMED_RS27970 | Not Available | Positive | 6103864 - 6104286 | 15129.7 |
| ester cyclase | AMED_RS27975 | Not Available | Positive | 6104321 - 6104698 | 13849.2 |
| abc transporter substrate-binding protein | AMED_RS27980 | Not Available | Positive | 6105021 - 6106151 | 40346.4 |
| sensor histidine kinase | AMED_RS27985 | Not Available | Positive | 6106268 - 6107497 | 43613.8 |
| response regulator transcription factor | AMED_RS27990 | Not Available | Positive | 6107494 - 6108141 | 22506.4 |
| hypothetical protein | AMED_RS27995 | Not Available | Negative | 6108252 - 6108506 | 8632.39 |
| right-handed parallel beta-helix repeat-containing protein | AMED_RS28000 | Not Available | Positive | 6108633 - 6110597 | 69112.5 |
| gntr family transcriptional regulator | AMED_RS28005 | Not Available | Positive | 6110954 - 6111301 | 12481.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
