Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS27905 | Not Available | Negative | 6095600 - 6095854 | 9288.69 |
| rhs repeat-associated core domain-containing protein | AMED_RS27910 | Not Available | Negative | 6095909 - 6096718 | 29027.8 |
| gaf and antar domain-containing protein | AMED_RS27915 | Not Available | Positive | 6096719 - 6097462 | 26945.5 |
| cpbp family intramembrane glutamic endopeptidase | AMED_RS27920 | Not Available | Negative | 6097501 - 6098133 | 21446.5 |
| atp-binding protein | AMED_RS27925 | Not Available | Positive | 6098184 - 6098471 | 9849.94 |
| metal-dependent hydrolase | AMED_RS27930 | Not Available | Positive | 6098468 - 6099125 | 23527.4 |
| cupin domain-containing protein | AMED_RS27940 | Not Available | Negative | 6099213 - 6099626 | 15041.5 |
| tetr/acrr family transcriptional regulator | AMED_RS27945 | Not Available | Positive | 6099826 - 6100425 | 21878.7 |
| alpha/beta fold hydrolase | AMED_RS27950 | Not Available | Negative | 6100597 - 6100872 | 9904.86 |
| glycosyltransferase | AMED_RS27955 | Not Available | Negative | 6101091 - 6102299 | 41908.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
