Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS27860 | Not Available | Positive | 6089008 - 6089355 | 12066.0 |
| hypothetical protein | AMED_RS27865 | Not Available | Negative | 6089370 - 6089549 | 6064.22 |
| hypothetical protein | AMED_RS27870 | Not Available | Negative | 6089629 - 6089814 | 6326.44 |
| flavodoxin domain-containing protein | AMED_RS27875 | Not Available | Negative | 6089823 - 6090344 | 17672.1 |
| hypothetical protein | AMED_RS48045 | Not Available | Positive | 6090665 - 6090817 | 5120.22 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS27880 | Not Available | Positive | 6090804 - 6091241 | 15688.6 |
| hypothetical protein | AMED_RS27885 | Not Available | Negative | 6092290 - 6092727 | 15170.6 |
| hypothetical protein | AMED_RS27890 | Not Available | Negative | 6092724 - 6093191 | 16850.8 |
| sensor histidine kinase | AMED_RS27895 | Not Available | Positive | 6093335 - 6094543 | 43047.4 |
| response regulator transcription factor | AMED_RS27900 | Not Available | Positive | 6094617 - 6095300 | 24103.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
