Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | AMED_RS27810 | Not Available | Positive | 6076210 - 6077604 | 50726.1 |
| cytochrome d ubiquinol oxidase subunit ii | AMED_RS27815 | Not Available | Positive | 6077617 - 6078636 | 36776.8 |
| thiol reductant abc exporter subunit cydd | AMED_RS27820 | Not Available | Positive | 6078633 - 6081980 | 116862.0 |
| phosphoketolase | AMED_RS27825 | Not Available | Negative | 6082149 - 6084494 | 86611.1 |
| universal stress protein | AMED_RS27830 | Not Available | Negative | 6084491 - 6085396 | 31668.9 |
| hpp family protein | AMED_RS27835 | Not Available | Negative | 6085393 - 6086004 | 21688.8 |
| universal stress protein | AMED_RS27840 | Not Available | Negative | 6086168 - 6087079 | 31553.8 |
| hypothetical protein | AMED_RS48850 | Not Available | Positive | 6087078 - 6087344 | 9235.91 |
| cbs domain-containing protein | AMED_RS27850 | Not Available | Negative | 6087320 - 6087955 | 22995.8 |
| universal stress protein | AMED_RS27855 | Not Available | Negative | 6087958 - 6088842 | 30665.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
