Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS02680 | Not Available | Negative | 518291 - 518665 | 12416.6 |
| demethylmenaquinone methyltransferase | AMED_RS02685 | Not Available | Positive | 518825 - 519514 | 25215.2 |
| geranylgeranyl reductase family protein | AMED_RS02690 | Not Available | Positive | 519525 - 520811 | 46201.6 |
| nadh-quinone oxidoreductase subunit a | AMED_RS02695 | Not Available | Positive | 521291 - 521710 | 15266.1 |
| nadh-quinone oxidoreductase subunit b family protein | AMED_RS02700 | Not Available | Positive | 521715 - 522263 | 19966.7 |
| nadh-quinone oxidoreductase subunit c | AMED_RS02705 | Not Available | Positive | 522268 - 523017 | 27640.2 |
| nadh-quinone oxidoreductase subunit d | AMED_RS02710 | Not Available | Positive | 523014 - 524396 | 50921.2 |
| nadh-quinone oxidoreductase subunit nuoe | AMED_RS02715 | Not Available | Positive | 524393 - 525250 | 30431.8 |
| nadh-quinone oxidoreductase subunit nuof | AMED_RS02720 | Not Available | Positive | 525250 - 526545 | 46754.9 |
| nadh-quinone oxidoreductase subunit g | AMED_RS02725 | Not Available | Positive | 526542 - 529013 | 87669.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
