Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS27715 | Not Available | Positive | 6054630 - 6056816 | 80923.8 |
| acg family fmn-binding oxidoreductase | AMED_RS27720 | Not Available | Positive | 6057130 - 6058140 | 36657.1 |
| shoct domain-containing protein | AMED_RS27725 | Not Available | Positive | 6058154 - 6058393 | 8815.86 |
| metalloregulator arsr/smtb family transcription factor | AMED_RS27730 | Not Available | Positive | 6058503 - 6058913 | 14542.7 |
| sulp family inorganic anion transporter | AMED_RS27735 | Not Available | Positive | 6058910 - 6060565 | 55278.3 |
| doxx family membrane protein | AMED_RS27740 | Not Available | Positive | 6060811 - 6061407 | 20920.6 |
| alcohol dehydrogenase catalytic domain-containing protein | AMED_RS48840 | Not Available | Positive | 6061657 - 6061821 | 5627.75 |
| zinc-binding dehydrogenase | AMED_RS48845 | Not Available | Positive | 6061751 - 6062083 | 10950.1 |
| universal stress protein | AMED_RS27750 | Not Available | Negative | 6061992 - 6062504 | 17790.2 |
| hypothetical protein | AMED_RS27755 | Not Available | Negative | 6062511 - 6062750 | 8656.51 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
