Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | AMED_RS27665 | Not Available | Positive | 6039228 - 6040439 | 43730.7 |
| gfo/idh/moca family protein | AMED_RS27670 | Not Available | Positive | 6040433 - 6041386 | 33550.1 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AMED_RS27675 | Not Available | Negative | 6041446 - 6042171 | 26819.1 |
| nad-dependent epimerase/dehydratase family protein | AMED_RS27680 | Not Available | Negative | 6042227 - 6043135 | 32503.0 |
| nad-dependent epimerase/dehydratase family protein | AMED_RS27685 | Not Available | Positive | 6043316 - 6044374 | 37285.5 |
| hypothetical protein | AMED_RS27690 | Not Available | Negative | 6044495 - 6045829 | 46375.0 |
| ricin domain-containing protein | AMED_RS27695 | Not Available | Negative | 6045864 - 6046436 | 21141.1 |
| tetratricopeptide repeat protein | AMED_RS27700 | Not Available | Negative | 6046521 - 6048737 | 77194.8 |
| rhs repeat-associated core domain-containing protein | AMED_RS27705 | Not Available | Negative | 6048943 - 6053760 | 171035.0 |
| trypco2 family protein | AMED_RS27710 | Not Available | Negative | 6054089 - 6054418 | 11236.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
