Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AMED_RS27565 | Not Available | Negative | 6022652 - 6023371 | 24206.3 |
| duf1772 domain-containing protein | AMED_RS27570 | Not Available | Negative | 6023382 - 6023810 | 14777.4 |
| antibiotic biosynthesis monooxygenase | AMED_RS27575 | Not Available | Negative | 6023945 - 6024250 | 11012.9 |
| antibiotic biosynthesis monooxygenase | AMED_RS27580 | Not Available | Negative | 6024247 - 6024579 | 12546.8 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS27585 | Not Available | Negative | 6024591 - 6025325 | 25663.1 |
| anthrone oxygenase family protein | AMED_RS27590 | Not Available | Negative | 6025345 - 6025794 | 15887.8 |
| srpbcc family protein | AMED_RS27595 | Not Available | Negative | 6025799 - 6026266 | 17976.1 |
| acyl carrier protein | AMED_RS27600 | Not Available | Negative | 6026268 - 6026513 | 8835.6 |
| ketosynthase chain-length factor | AMED_RS27605 | Not Available | Negative | 6026538 - 6027776 | 42382.1 |
| beta-ketoacyl synthase | AMED_RS27610 | Not Available | Negative | 6027773 - 6029032 | 43480.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
