Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AMED_RS27515 | Not Available | Negative | 6009401 - 6010378 | 34764.9 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AMED_RS27520 | Not Available | Negative | 6010378 - 6011208 | 30302.1 |
| nucleotide disphospho-sugar-binding domain-containing protein | AMED_RS27525 | Not Available | Negative | 6011219 - 6012397 | 42570.4 |
| nucleotide disphospho-sugar-binding domain-containing protein | AMED_RS27530 | Not Available | Negative | 6012574 - 6013719 | 39807.5 |
| lipopolysaccharide biosynthesis protein rfbh | AMED_RS27535 | Not Available | Positive | 6013950 - 6015257 | 47455.7 |
| afsr/sarp family transcriptional regulator | AMED_RS27540 | Not Available | Positive | 6015745 - 6017598 | 66637.3 |
| nucleotide disphospho-sugar-binding domain-containing protein | AMED_RS27545 | Not Available | Negative | 6017762 - 6018874 | 38212.2 |
| pep/pyruvate-binding domain-containing protein | AMED_RS27550 | Not Available | Negative | 6018906 - 6021263 | 83052.7 |
| nad(p)-dependent oxidoreductase | AMED_RS27555 | Not Available | Negative | 6021260 - 6022246 | 32610.8 |
| scha/curd-like domain-containing protein | AMED_RS27560 | Not Available | Negative | 6022252 - 6022635 | 14218.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
