Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AMED_RS27465 | Not Available | Negative | 5996301 - 5997152 | 30959.8 |
| nad(p)-dependent oxidoreductase | AMED_RS27470 | Not Available | Positive | 5997315 - 5998076 | 27840.8 |
| class i sam-dependent methyltransferase | AMED_RS27475 | Not Available | Negative | 5998120 - 5999268 | 42354.8 |
| amp-binding protein | AMED_RS27480 | Not Available | Negative | 5999276 - 6002344 | 108298.0 |
| nucleotide disphospho-sugar-binding domain-containing protein | AMED_RS27485 | Not Available | Negative | 6002381 - 6003565 | 41454.2 |
| nucleotide disphospho-sugar-binding domain-containing protein | AMED_RS27490 | Not Available | Negative | 6003565 - 6004767 | 41537.0 |
| glycosyltransferase | AMED_RS27495 | Not Available | Negative | 6004769 - 6005896 | 39230.5 |
| nucleotide disphospho-sugar-binding domain-containing protein | AMED_RS27500 | Not Available | Negative | 6005940 - 6007100 | 40431.8 |
| glycosyltransferase | AMED_RS27505 | Not Available | Positive | 6007237 - 6008370 | 39663.8 |
| abc transporter permease | AMED_RS27510 | Not Available | Negative | 6008595 - 6009404 | 28487.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
