Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| condensation domain-containing protein | AMED_RS27415 | Not Available | Negative | 5986102 - 5987568 | 52145.2 |
| enediyne antibiotic chromoprotein | AMED_RS27420 | Not Available | Positive | 5987786 - 5988235 | 13969.3 |
| nucleotide disphospho-sugar-binding domain-containing protein | AMED_RS27425 | Not Available | Negative | 5988311 - 5989480 | 41759.4 |
| hypothetical protein | AMED_RS27430 | Not Available | Positive | 5989714 - 5989929 | 7463.46 |
| tryptophan 2,3-dioxygenase | AMED_RS27435 | Not Available | Negative | 5990029 - 5991081 | 39116.2 |
| methyltransferase | AMED_RS27440 | Not Available | Negative | 5991081 - 5992109 | 36379.3 |
| ndp-hexose 2,3-dehydratase family protein | AMED_RS27445 | Not Available | Negative | 5992130 - 5993551 | 52282.6 |
| response regulator transcription factor | AMED_RS27450 | Not Available | Negative | 5993650 - 5994291 | 22335.2 |
| sensor histidine kinase | AMED_RS27455 | Not Available | Negative | 5994288 - 5995466 | 41365.4 |
| abc transporter permease | AMED_RS27460 | Not Available | Negative | 5995475 - 5996308 | 29964.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
