Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS27315 | Not Available | Positive | 5961238 - 5961450 | 7758.04 |
| effector-associated constant component eacc1 | AMED_RS27320 | Not Available | Positive | 5961466 - 5961837 | 13310.9 |
| caspase, eacc1-associated type | AMED_RS27325 | Not Available | Positive | 5961883 - 5963373 | 54027.3 |
| hypothetical protein | AMED_RS27330 | Not Available | Negative | 5963632 - 5964438 | 29081.9 |
| duf4387 domain-containing protein | AMED_RS27335 | Not Available | Negative | 5964435 - 5964779 | 12869.3 |
| acyclic terpene utilization atua family protein | AMED_RS27340 | Not Available | Negative | 5964772 - 5966133 | 47637.6 |
| mfs transporter | AMED_RS27345 | Not Available | Negative | 5966213 - 5967478 | 44712.5 |
| gntr family transcriptional regulator | AMED_RS27350 | Not Available | Positive | 5967556 - 5968284 | 26353.6 |
| duf1963 domain-containing protein | AMED_RS27355 | Not Available | Negative | 5968354 - 5969259 | 33457.4 |
| hypothetical protein | AMED_RS27360 | Not Available | Positive | 5969578 - 5971032 | 52537.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
