Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AMED_RS27265 | Not Available | Negative | 5950201 - 5951508 | 46650.9 |
| substrate-binding domain-containing protein | AMED_RS27270 | Not Available | Negative | 5951588 - 5952670 | 38414.4 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS27275 | Not Available | Positive | 5952850 - 5954673 | 67626.1 |
| smp-30/gluconolactonase/lre family protein | AMED_RS27280 | Not Available | Positive | 5954670 - 5956196 | 52699.4 |
| mdr family mfs transporter | AMED_RS27285 | Not Available | Positive | 5956193 - 5957659 | 50788.2 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS27290 | Not Available | Positive | 5957640 - 5958401 | 25459.2 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS27295 | Not Available | Negative | 5958446 - 5959408 | 33223.5 |
| tetr/acrr family transcriptional regulator | AMED_RS27300 | Not Available | Positive | 5959460 - 5960050 | 20990.1 |
| tetr/acrr family transcriptional regulator | AMED_RS27305 | Not Available | Positive | 5960076 - 5960651 | 20815.9 |
| hypothetical protein | AMED_RS27310 | Not Available | Negative | 5960648 - 5961085 | 15478.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
