Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS47910 | Not Available | Negative | 507902 - 508039 | 4694.62 |
| o-succinylbenzoate--coa ligase | AMED_RS02635 | Not Available | Negative | 508091 - 509215 | 38267.6 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | AMED_RS02640 | Not Available | Negative | 509217 - 510140 | 34085.2 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | AMED_RS02645 | Not Available | Positive | 510198 - 511874 | 59565.4 |
| m1 family metallopeptidase | AMED_RS02650 | Not Available | Positive | 511996 - 513516 | 54200.8 |
| duf3592 domain-containing protein | AMED_RS02655 | Not Available | Positive | 513539 - 513976 | 15658.9 |
| inositol monophosphatase | AMED_RS02660 | Not Available | Negative | 514272 - 515102 | 28575.9 |
| glycosyltransferase family 1 protein | AMED_RS02665 | Not Available | Positive | 515280 - 516350 | 38033.0 |
| glycosyltransferase family 1 protein | AMED_RS02670 | Not Available | Positive | 516352 - 517455 | 39203.0 |
| afsr/sarp family transcriptional regulator | AMED_RS02675 | Not Available | Positive | 517536 - 518309 | 28360.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
