Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase family protein | AMED_RS27215 | Not Available | Positive | 5938075 - 5939034 | 33373.2 |
| hypothetical protein | AMED_RS27220 | Not Available | Negative | 5939102 - 5939602 | 18093.2 |
| hypothetical protein | AMED_RS27225 | Not Available | Positive | 5940448 - 5940933 | 18276.0 |
| carbon-nitrogen hydrolase family protein | AMED_RS27230 | Not Available | Positive | 5941163 - 5942155 | 36969.8 |
| right-handed parallel beta-helix repeat-containing protein | AMED_RS27235 | Not Available | Negative | 5942206 - 5943858 | 56999.0 |
| family 43 glycosylhydrolase | AMED_RS27240 | Not Available | Negative | 5943915 - 5945408 | 51914.7 |
| duf2264 domain-containing protein | AMED_RS27245 | Not Available | Negative | 5945574 - 5947403 | 65196.3 |
| hydroxyacid dehydrogenase | AMED_RS27250 | Not Available | Negative | 5947400 - 5948404 | 35566.9 |
| carbohydrate abc transporter permease | AMED_RS27255 | Not Available | Negative | 5948401 - 5949243 | 30557.0 |
| carbohydrate abc transporter permease | AMED_RS27260 | Not Available | Negative | 5949240 - 5950190 | 33836.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
