Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS27165 | Not Available | Negative | 5929233 - 5929385 | 5004.03 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | AMED_RS27170 | Not Available | Negative | 5929382 - 5930908 | 55541.7 |
| doxx family protein | AMED_RS27175 | Not Available | Negative | 5930905 - 5931246 | 10998.1 |
| acyl-coa synthetase | AMED_RS27180 | Not Available | Negative | 5931243 - 5933084 | 64002.5 |
| fumarylacetoacetate hydrolase family protein | AMED_RS27185 | Not Available | Negative | 5933081 - 5934022 | 33500.1 |
| voc family protein | AMED_RS27190 | Not Available | Negative | 5934019 - 5935152 | 41703.3 |
| tetr/acrr family transcriptional regulator | AMED_RS27195 | Not Available | Positive | 5935284 - 5935940 | 23529.9 |
| duf1003 domain-containing protein | AMED_RS27200 | Not Available | Negative | 5935951 - 5936370 | 16014.4 |
| tetr/acrr family transcriptional regulator | AMED_RS27205 | Not Available | Negative | 5936445 - 5937101 | 23211.6 |
| hypothetical protein | AMED_RS27210 | Not Available | Positive | 5937274 - 5937885 | 20774.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
