Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase | AMED_RS27110 | Not Available | Negative | 5919383 - 5920981 | 56689.2 |
| coce/nond family hydrolase | AMED_RS27115 | Not Available | Negative | 5920978 - 5922687 | 61725.0 |
| hypothetical protein | AMED_RS27120 | Not Available | Negative | 5922853 - 5923035 | 6039.41 |
| m20 family metallopeptidase | AMED_RS27125 | Not Available | Negative | 5923032 - 5924213 | 41417.5 |
| lrp/asnc family transcriptional regulator | AMED_RS27130 | Not Available | Positive | 5924315 - 5925322 | 36724.2 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS27135 | Not Available | Negative | 5925348 - 5925791 | 16140.2 |
| amidohydrolase family protein | AMED_RS27140 | Not Available | Positive | 5925883 - 5927100 | 42723.9 |
| hypothetical protein | AMED_RS27145 | Not Available | Negative | 5927209 - 5928252 | 36067.8 |
| sige family rna polymerase sigma factor | AMED_RS27150 | Not Available | Negative | 5928252 - 5928752 | 19232.9 |
| metal-dependent hydrolase | AMED_RS27155 | Not Available | Negative | 5928906 - 5929094 | 6411.76 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
