Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hit domain-containing protein | AMED_RS27010 | Not Available | Negative | 5900364 - 5900906 | 19788.8 |
| threonine--trna ligase | AMED_RS27015 | Not Available | Negative | 5900903 - 5902930 | 75698.5 |
| malonic semialdehyde reductase | AMED_RS27020 | Not Available | Negative | 5903063 - 5903677 | 22619.8 |
| sugar transferase | AMED_RS27025 | Not Available | Negative | 5904115 - 5905638 | 55687.2 |
| Trna-val | Not Available | Not Available | Positive | 5906448 - 5906522 | Not Available |
| ssga family sporulation/cell division regulator | AMED_RS27035 | Not Available | Positive | 5906913 - 5907338 | 15618.3 |
| Trna-gly | Not Available | Not Available | Positive | 5907451 - 5907523 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 5907547 - 5907617 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 5907619 - 5907693 | Not Available |
| integrase | AMED_RS27055 | Not Available | Negative | 5907750 - 5908856 | 41930.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
